Detailed information of evm.model.contig_49145.3 in Platygyra sinensis

Genomic Location: contig_49145:25507...34109
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyDUB|ULP|ULP · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for evm.model.contig_49145.3. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR044613
all species →		FamilyNEDD8-specific protease 1/2-likeInterproscan
IPR003653
all species →		DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46468
all species →		SENTRIN-SPECIFIC PROTEASE 8Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000338
all species →		Biological Processprotein deneddylationInterproscan
GO:0019784
all species →		Molecular FunctiondeNEDDylase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08597SENP8, NEDP1, DEN1; sentrin-specific protease 8EC:3.4.22.68
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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