Detailed information of evm.model.contig_50175.2 in Platygyra sinensis

Genomic Location: contig_50175:29594...32473
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan
PF17776
all species →		NLRC4_HD2NLRC4 helical domain HD2DomainInterproscan
PF05729
all species →		NACHTNACHT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR051261
all species →		FamilyNOD-like receptor (NLR)Interproscan
IPR041267
all species →		DomainNACHT, LRR and PYD domains-containing protein, helical domain HD2Interproscan
IPR038359
all species →		Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24106
all species →		NACHT, LRR AND CARD DOMAINS-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_50175.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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