Detailed information of evm.model.contig_50179.1 in Platygyra sinensis

Genomic Location: contig_50179:579...7925
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08513
all species →		LisHLisHDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033270
all species →		FamilyVPRBP/DCAF1 familyInterproscan
IPR006594
all species →		Conserved_siteLIS1 homology motifInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13129
all species →		VPRBP PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0080008
all species →		Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_50179.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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