Detailed information of evm.model.contig_50484.1 in Platygyra sinensis

Genomic Location: contig_50484:594...19783
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008274 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for evm.model.contig_50484.1 in Platygyra sinensis.
 InterPro
InterPro termTypeDescriptionSource
IPR038868
all species →		FamilyBRCA1-A complex subunit RAP80Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15932
all species →		UBIQUITIN INTERACTION MOTIF-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006302
all species →		Biological Processdouble-strand break repairInterproscan
GO:0042393
all species →		Molecular Functionhistone bindingInterproscan
GO:0045739
all species →		Biological Processpositive regulation of DNA repairInterproscan
GO:0070530
all species →		Molecular FunctionK63-linked polyubiquitin modification-dependent protein bindingInterproscan
GO:0070531
all species →		Cellular ComponentBRCA1-A complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_50484.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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