Detailed information of evm.model.contig_5061.1 in Platygyra sinensis

Genomic Location: contig_5061:638...7999
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04843
all species →
Herpes_teg_NHerpesvirus tegument protein, N-terminal conserved regionFamilyInterproscan
PF20209
all species →
DUF6570Domain of unknown function (DUF6570)DomainInterproscan
PF05970
all species →
PIF1PIF1-like helicaseFamilyInterproscan
PF14214
all species →
Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006928
all species →
DomainHerpesvirus large tegument protein, USP domainInterproscan
IPR036691
all species →
Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038765
all species →
Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR046700
all species →
DomainDomain of unknown function DUF6570Interproscan
IPR010285
all species →
FamilyDNA helicase Pif1-likeInterproscan
IPR051055
all species →
FamilyPIF1 DNA helicaseInterproscan
IPR025476
all species →
DomainHelitron helicase-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47642
all species →
ATP-DEPENDENT DNA HELICASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000723
all species →
Biological Processtelomere maintenanceInterproscan
GO:0003678
all species →
Molecular FunctionDNA helicase activityInterproscan
GO:0006281
all species →
Biological ProcessDNA repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_5061.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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