Detailed information of evm.model.contig_51002.1 in Platygyra sinensis

Genomic Location: contig_51002:206...4644
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04841
all species →		Vps16_NVps16, N-terminal regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016534
all species →		FamilyVacuolar protein sorting-associated protein 16Interproscan
IPR006926
all species →		DomainVps16, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12811
all species →		VACUOLAR PROTEIN SORTING VPS16Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003779
all species →		Molecular Functionactin bindingInterproscan
GO:0005765
all species →		Cellular Componentlysosomal membraneInterproscan
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0007033
all species →		Biological Processvacuole organizationInterproscan
GO:0016197
all species →		Biological Processendosomal transportInterproscan
GO:0030897
all species →		Cellular ComponentHOPS complexInterproscan
GO:0042144
all species →		Biological Processvacuole fusion, non-autophagicInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_51002.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP