Detailed information of evm.model.contig_51856.4 in Platygyra sinensis

Genomic Location: contig_51856:38238...40414
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20642
all species →		TAF1C_HBTAF1C, helical bundle domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038801
all species →		FamilyTATA box-binding protein-associated factor RNA polymerase I subunit CInterproscan
IPR049090
all species →		DomainTAF1C, helical bundle domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15319
all species →		TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001164
all species →		Molecular FunctionRNA polymerase I core promoter sequence-specific DNA bindingInterproscan
GO:0001650
all species →		Cellular Componentfibrillar centerInterproscan
GO:0006360
all species →		Biological Processtranscription by RNA polymerase IInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_51856.4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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