Detailed information of evm.model.contig_52171.4 in Platygyra sinensis

Genomic Location: contig_52171:17912...23708
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF07699
all species →		Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR050831
all species →		FamilyCarcinoembryonic antigen-related cell adhesionInterproscan
IPR011641
all species →		DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44427
all species →		CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19Interproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.contig_52171.4. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_52171.4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP