Detailed information of evm.model.contig_52707.7 in Platygyra sinensis

Genomic Location: contig_52707:27169...32227
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyDUB|OTU|OTU · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20209
all species →		DUF6570Domain of unknown function (DUF6570)DomainInterproscan
PF21107
all species →		STPRsSTPRs (score and three amino acid peptide repeats)RepeatInterproscan
PF02338
all species →		OTUOTU-like cysteine proteaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050704
all species →		FamilyOTU domain-containing ubiquitin thioesteraseInterproscan
IPR003323
all species →		DomainOTU domainInterproscan
IPR046700
all species →		DomainDomain of unknown function DUF6570Interproscan
IPR048998
all species →		DomainSTPR domainInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12419
all species →		OTU DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_52707.7.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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