Gene detail

Detailed information of evm.model.contig_53458.2 in Platygyra sinensis

Genomic Location: contig_53458:23803...39720
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF01833 all species →	TIG	IPT/TIG domain	Domain	Interproscan
PF09457 all species →	RBD-FIP	FIP domain	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR037789 all species →	Family	Rab11-family interacting protein class I	Interproscan
IPR002909 all species →	Domain	IPT domain	Interproscan
IPR037245 all species →	Homologous_superfamily	FIP-RBD, C-terminal domain superfamily	Interproscan
IPR014756 all species →	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR019018 all species →	Domain	Rab-binding domain FIP-RBD	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15746 all species →	RAB11-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0045055 all species →	Biological Process	regulated exocytosis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_53458.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.