Detailed information of evm.model.contig_53935.6 in Platygyra sinensis

Genomic Location: contig_53935:50562...53790
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for evm.model.contig_53935.6. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR000626
all species →		DomainUbiquitin-like domainInterproscan
IPR040352
all species →		FamilyTransmembrane and ubiquitin-like domain-containing protein 1/2Interproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14557
all species →		PROTEIN C7ORF21Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0030433
all species →		Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0036503
all species →		Biological ProcessERAD pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23340TMUB; transmembrane and ubiquitin-like domain-containing protein-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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