Detailed information of evm.model.contig_54334.2 in Platygyra sinensis

Genomic Location: contig_54334:19911...22969
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21363
all species →		TRAF3_RINGTNF receptor-associated factor 2/3/5, RING domainDomainInterproscan
PF02176
all species →		zf-TRAFTRAF-type zinc fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001293
all species →		DomainZinc finger, TRAF-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR049440
all species →		DomainTNF receptor-associated factor 3/5, RING domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131
all species →		TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0033209
all species →		Biological Processtumor necrosis factor-mediated signaling pathwayInterproscan
GO:0070534
all species →		Biological Processprotein K63-linked ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_54334.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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