Detailed information of evm.model.contig_5518.1 in Platygyra sinensis

Genomic Location: contig_5518:3672...10413
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00515
all species →		TPR_1Tetratricopeptide repeatRepeatInterproscan
PF13414
all species →		TPR_11TPR repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR052384
all species →		FamilyO-mannosyl-transferase TMTCInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44216
all species →		PROTEIN O-MANNOSYL-TRANSFERASE TMTC2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000030
all species →		Molecular Functionmannosyltransferase activityInterproscan
GO:0005789
all species →		Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0035269
all species →		Biological Processprotein O-linked mannosylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_5518.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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