Detailed information of evm.model.contig_55396.3 in Platygyra sinensis

Genomic Location: contig_55396:17531...22386
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00128
all species →		Alpha-amylaseAlpha amylase, catalytic domainDomainInterproscan
PF16028
all species →		SLC3A2_NSolute carrier family 3 member 2 N-terminusFamilyInterproscan
PF16657
all species →		Malt_amylase_CMaltogenic Amylase, C-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006047
all species →		DomainGlycosyl hydrolase, family 13, catalytic domainInterproscan
IPR017853
all species →		Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR045857
all species →		Homologous_superfamilyOligo-1,6-glucosidase, domain 2Interproscan
IPR031984
all species →		DomainSolute carrier family 3 member 2, N-terminal domainInterproscan
IPR013780
all species →		Homologous_superfamilyGlycosyl hydrolase, all-betaInterproscan
IPR032091
all species →		DomainMaltogenic Amylase, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10357
all species →		ALPHA-AMYLASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01187malZ; alpha-glucosidaseEC:3.2.1.20
Starch and sucrose metabolismko00500deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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