Gene detail

Detailed information of evm.model.contig_5583.2 in Platygyra sinensis

Genomic Location: contig_5583:14854...19217
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15612 all species →	WHIM1	WSTF, HB1, Itc1p, MBD9 motif 1	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018501 all species →	Domain	DDT domain	Interproscan
IPR047174 all species →	Family	Tyrosine-protein kinase BAZ1B	Interproscan
IPR028942 all species →	Domain	WHIM1 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46802 all species →	TYROSINE-PROTEIN KINASE BAZ1B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0006974 all species →	Biological Process	DNA damage response	Interproscan
GO:0035173 all species →	Molecular Function	histone kinase activity	Interproscan
GO:0042393 all species →	Molecular Function	histone binding	Interproscan
GO:0090535 all species →	Cellular Component	WICH complex	Interproscan
GO:0140801 all species →	Molecular Function	histone H2AXY142 kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_5583.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.