Detailed information of evm.model.contig_56277.5 in Platygyra sinensis

Genomic Location: contig_56277:47433...67346
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015496
all species →		FamilyUbiquilinInterproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR006636
all species →		DomainHeat shock chaperonin-bindingInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10677
all species →		UBIQUILINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0031593
all species →		Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_56277.5.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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