Detailed information of evm.model.contig_56648.1 in Platygyra sinensis

Genomic Location: contig_56648:59...12353
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21273
all species →		SNX17-27-31_F1_FERMSortin nexin 17/27/31, FERM domain, F1 lobeDomainInterproscan
PF18116
all species →		SNX17_FERM_CSorting Nexin 17 FERM C-terminal domainDomainInterproscan
PF21271
all species →		SNX17-31_F2_FERMSortin nexin 17/31, FERM domain, F2 lobeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048763
all species →		DomainSortin nexin 17/31, FERM domain, F1 lobeInterproscan
IPR040842
all species →		DomainSorting nexin-17/31, FERM domainInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR028666
all species →		DomainSorting nexin-17, FERM domain, N-terminal subdomainInterproscan
IPR048767
all species →		DomainSortin nexin 17/31, FERM domain, F2 lobeInterproscan
IPR037831
all species →		FamilySNX17/27/31-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12431
all species →		SORTING NEXIN 17 AND 27Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005769
all species →		Cellular Componentearly endosomeInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0035091
all species →		Molecular Functionphosphatidylinositol bindingInterproscan
GO:1990126
all species →		Biological Processendocytic recyclingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_56648.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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