Gene detail

Detailed information of evm.model.contig_57164.1 in Platygyra sinensis

Genomic Location: contig_57164:4714...25369
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13866 all species →	zf-SAP30	SAP30 zinc-finger	Domain	Interproscan
PF13867 all species →	SAP30_Sin3_bdg	Sin3 binding region of histone deacetylase complex subunit SAP30	Family	Interproscan
PF00122 all species →	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan
PF16209 all species →	PhoLip_ATPase_N	Phospholipid-translocating ATPase N-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025717 all species →	Domain	Histone deacetylase complex subunit SAP30 zinc-finger	Interproscan
IPR001757 all species →	Family	P-type ATPase	Interproscan
IPR025718 all species →	Domain	Histone deacetylase complex subunit SAP30, Sin3 binding domain	Interproscan
IPR008250 all species →	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR032631 all species →	Domain	P-type ATPase, N-terminal	Interproscan
IPR023298 all species →	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24092 all species →	PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005215 all species →	Molecular Function	transporter activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0045332 all species →	Biological Process	phospholipid translocation	Interproscan
GO:0140326 all species →	Molecular Function	ATPase-coupled intramembrane lipid transporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_57164.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.