Gene detail

Detailed information of evm.model.contig_57478.2 in Platygyra sinensis

Genomic Location: contig_57478:9082...13167
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03031 all species →	NIF	NLI interacting factor-like phosphatase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004274 all species →	Domain	FCP1 homology domain	Interproscan
IPR011943 all species →	Domain	HAD-superfamily hydrolase, subfamily IIID	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR051658 all species →	Family	Ubiquitin-like domain-containing CTD phosphatase 1	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48405 all species →	UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004721 all species →	Molecular Function	phosphoprotein phosphatase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0004722 all species →	Molecular Function	protein serine/threonine phosphatase activity	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17618	UBLCP1; ubiquitin-like domain-containing CTD phosphatase 1	EC:3.1.3.16	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.