Detailed information of evm.model.contig_60164.1 in Platygyra sinensis

Genomic Location: contig_60164:4364...6839
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
No Pfam domain signature was detected for evm.model.contig_60164.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR050191
all species →		FamilyATP-dependent DNA ligaseInterproscan
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45674
all species →		DNA LIGASE 1/3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003910
all species →		Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006266
all species →		Biological ProcessDNA ligationInterproscan
GO:0006273
all species →		Biological Processlagging strand elongationInterproscan
GO:1903461
all species →		Biological ProcessOkazaki fragment processing involved in mitotic DNA replicationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_60164.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP