Gene detail

Detailed information of evm.model.contig_61296.1 in Platygyra sinensis

Genomic Location: contig_61296:823...6805
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00441 all species →	Acyl-CoA_dh_1	Acyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036250 all species →	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR006089 all species →	Conserved_site	Acyl-CoA dehydrogenase, conserved site	Interproscan
IPR009075 all species →	Domain	Acyl-CoA dehydrogenase/oxidase, C-terminal	Interproscan
IPR052033 all species →	Family	Mitochondrial Glutaryl-CoA Dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42807 all species →	GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016627 all species →	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0003995 all species →	Molecular Function	acyl-CoA dehydrogenase activity	Interproscan
GO:0000062 all species →	Molecular Function	fatty-acyl-CoA binding	Interproscan
GO:0004361 all species →	Molecular Function	glutaryl-CoA dehydrogenase activity	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0033539 all species →	Biological Process	fatty acid beta-oxidation using acyl-CoA dehydrogenase	Interproscan
GO:0046949 all species →	Biological Process	fatty-acyl-CoA biosynthetic process	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_61296.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.