Gene detail

Detailed information of evm.model.contig_62054.1 in Platygyra sinensis

Genomic Location: contig_62054:637...7311
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02775 all species →	TPP_enzyme_C	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051818 all species →	Family	Thiamine pyrophosphate-dependent decarboxylase	Interproscan
IPR000399 all species →	Conserved_site	TPP-binding enzyme, conserved site	Interproscan
IPR011766 all species →	Domain	Thiamine pyrophosphate enzyme, TPP-binding	Interproscan
IPR029061 all species →	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42818 all species →	SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0030976 all species →	Molecular Function	thiamine pyrophosphate binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00615	E2.2.1.1, tktA, tktB; transketolase	EC:2.2.1.1	Biosynthesis of ansamycins	ko01051	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.