Gene detail

Detailed information of evm.model.contig_62141.2 in Platygyra sinensis

Genomic Location: contig_62141:6617...13916
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03114 all species →	BAR	BAR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004148 all species →	Domain	BAR domain	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR046982 all species →	Family	Bridging integrator 3/RVS161-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47174 all species →	BRIDGING INTEGRATOR 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0008289 all species →	Molecular Function	lipid binding	Interproscan
GO:0030479 all species →	Cellular Component	actin cortical patch	Interproscan
GO:0051666 all species →	Biological Process	actin cortical patch localization	Interproscan
GO:0097320 all species →	Biological Process	plasma membrane tubulation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20120	BIN3; bridging integrator 3	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.