Gene detail

Detailed information of evm.model.contig_62332.1 in Platygyra sinensis

Genomic Location: contig_62332:3101...5195
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR039906 all species →	Family	Nuclear anchorage protein 1/Nesprin-1/2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21524 all species →	SPECTRIN REPEAT CONTAINING NUCLEAR ENVELOPE PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005635 all species →	Cellular Component	nuclear envelope	Interproscan
GO:0006997 all species →	Biological Process	nucleus organization	Interproscan
GO:0007010 all species →	Biological Process	cytoskeleton organization	Interproscan
GO:0007097 all species →	Biological Process	nuclear migration	Interproscan
GO:0019894 all species →	Molecular Function	kinesin binding	Interproscan
GO:0048471 all species →	Cellular Component	perinuclear region of cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_62332.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.