Gene detail

Detailed information of evm.model.contig_62379.6 in Platygyra sinensis

Genomic Location: contig_62379:57480...58466
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01040 all species →	UbiA	UbiA prenyltransferase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044878 all species →	Homologous_superfamily	UbiA prenyltransferase superfamily	Interproscan
IPR026046 all species →	Family	UbiA prenyltransferase domain containing protein 1	Interproscan
IPR000537 all species →	Family	UbiA prenyltransferase family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13929 all species →	1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004659 all species →	Molecular Function	prenyltransferase activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016765 all species →	Molecular Function	transferase activity, transferring alkyl or aryl (other than methyl) groups	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0009234 all species →	Biological Process	menaquinone biosynthetic process	Interproscan
GO:0030173 all species →	Cellular Component	obsolete integral component of Golgi membrane	Interproscan
GO:0032194 all species →	Biological Process	ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	Interproscan
GO:0042371 all species →	Biological Process	vitamin K biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00810	UBIAD1; menadiol prenyltransferase	EC:2.5.1.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.