Gene detail

Detailed information of evm.model.contig_62540.2 in Platygyra sinensis

Genomic Location: contig_62540:22893...56445
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.contig_62540.2

ATGGAACTAGCAGCCCAAAGATCAATGTTTCAGAAAGACCAAATGAAGAAGAGCAAGAGCAGAAGGATCAGTTTGTTCCAGCAAGCCCGTTTCATTTCAACAGAAAGGCAAGCAAACATATCAGGCCGAACCATGAACGCTGGAAATCATCAGCAAGTGGACTGTTTAGATCCATATGCTCATCAAAGAATCGCAGTGTTATTCATAAGCTACTCAAATGAATCCAACAACTCGCCACGCCCATGTATAAGTCCATGGGCCGTTTTCATGGAGTTTTATGGACGAAACGACATCACTCTTGGCGGGTTTCTGGAGATATACTGTTTTAGACCGTCATACATCTGCCCCAATCCCAACTGTGACATACCCATGGTAGATCACGTGAGGTACTTTGCGCATGGCACTGGGTCTGTCTACATTCACATGAGGAACCTTGAATCACCTATACCAGGATTCCAACACACTATCCTTACATGGAGCTGGTGCAAGGAATGCAAGCAGGTAACACCAATTGTCCCCCTCTCCCCTGAGGCATGGGCATTGTCCTTTGCTAAGTACCTGGAGCTGAGATTCTATGCGGGAAGTTACAAGCGCCGAGCAAGTGTGGAGCCATGCGGTCACTCACTACATAAGGATCATTATCAATACTTTGCTTATGCTAACATGGTGGCTTCATTCAAGTACCGTCCTATCACACTGTTTGAGATAGCTATCCCTTCTCCACGGATTTATATCAATGAGAAGACCAGGGATGCAAGCTTGTGGATCAATGACCTGCGCGCTATAGCAACAAGAGGAGAGACAGTGTTTGCTGCAGTTTTTGAACGGCTTGAATCTCTAAAGGATTACTCCACTCAACCGGACCGTCATGTTAAGATAGAGCAGTTTTTTGTAGCACTCGATGAGGAGCATACACGCTTCTTGGAACAAGTTGAAATTGTGGAAAAGAAAGCGGCCAGTCTTCTGGAACCACAGAATCCGCTGGAAACGAAGAGCACGGGCTCATGTGAACACTTGGGCCCTGATGATAGACTGGCACTAGAGTACGTCATAGCAAACAGCTTGAATAGTCTCAAGAAAACCCTATGTGAAGCTGTAGAAAACTGGAATAATACCCTTCAAGAATATTTCCAAGCTGAAAAGAAGAAGAACAACAAGTCCATGACGTCGTCCACGAGGGAAGGAAAGTTCATGTCTTCAGTACAACTCGACGGAAAGTTACCGCCAGAACAACCGAGCAAATCGACTGACCTTCTGGGGGTCCGAGGTTTGGACGTGAATCCCCAGGAAGGAAACATCAGCCCCTCCCAGACTCCCTGGGGATCAAGATCACCCTCACCCTACCCCAGCCCTGACATAAATGAAGACTCGCCTGAAGTGTTGTGTGGGCCAGACGTAGAAGTAATGCACGTGACCAGTGGATTTCGACCAATCCAAAGCGCGGAAAAAAACGTCAACACCCCAGCAGACTCCCCCACGGAAGGAATTTTACCTGTGGGAGGGGTCGTTAAGGGACATTCGTTGCCTGGTGCAAAAAATGAGTCTTTAGCAAGGGTCTGTCTTGAGAAGAATCTCACAGAGCTGCAAAGGTCGGAAACCCTCAAGGCCTTTGTTGTTATTGACGCAAAAAGTGAGAGAGTTCTAGATGGCAGTTTATCAATTGCAAAAGAAAACATACAAGCAGTAGATCTTGGAGGTAAGCGGGAATCTTGTGGAGACAAGATGGACGATGATGCAAAGGAACCTTCCGAGGATAAGAGGGACGGTACAAAGGAGCCTATCGGAGATAGCGTTGGAGGTATAAAGAAACCTTCTGGGGACAAGATGGATGATAACAAATCAAAGGTGTTTTCCACTGAGAATGTAAAGAGCCTGACGCCTGACGGTGTCCTGACTGGAGAAAATGGCCCCTCTGGAGGAATTATGGAGGAGACAAAGCGCAGTTCGTGGTATATCATCGAAGGGTCGAACGGGGAAGAGAAAACAGTTGACAATTGTAATCCTAAAGGTAATGGTGACCTATCTAAAAGTCAGGAACAGCTGTCTACCTCAGGAGAATTAAACCGTGAAGATAAAGGAACAGAGAAGTTTGTCCCTGGGAAGCCTTTCACGTTTGGTCATCGGAGGGTTGCCTCTTCCCCTCCTGTAATTACTGTATCATCAGTTGAGAGCACGTCGTTGCCCGGGGGGGAAATCGCAAGTGGTGTGACTTACCTTGAGAGGAGCCGAAGTGATTCTGATATAAGTATACGAGTCAAACAAGAACTTGACGAGTCTGTGATGACGACAGAAGACGACATTGATGGAAGTGGGAAAATGGGCAACGACAAAACAGCAGAACGCAGCGATACAGAAGGCTCTATTGAAGAACGGAGTATGCCTGATTTCAGAAAAGTGAACACGATACCCAAAGCTCTACACAAAAAGAGTCTTTTTAGGACCCAGTCTGTTGAGGCCACACCGCAGCACCGTTCATCAAAGAAGGTTGTTGCTCGTTCCCAGTCCTGGGCGGTCGTTCAGTGGCAAGCAACAGCTAAGAAGGCTCTTACTACTGAAGGAGGAGACCCGGATTCTACGCCTGCTGCCGACGGATTAACAGGAACAAGCAAGCGTGGTAAAGTGAAGCACATAATCTCATCATTCATGTCCAGCTCAGCTTTTCAACCAGTTGCCTCCACCTTCCCAATTCATGAACACCACCTCCTCCCCCCTGGGGAGAAAGTGCTTGTAGTTGTAAGTGAGAAGGAAACGAGCTCTATCATTGCCTACACACTGAGTACTAAAGAATATAACGAGTGCCTGCATGACATACAGCGGGCCTTGTCAGAAGTTATGAATGGATCAACCAGGGAATTTCTACAGAACAAAAGTGATTTCGGTAAGTCTATTGATGCATCTCTCAAGGGACAGCCACAGGTGGACATTTCTCACGGTTCAGACAAGATTATTAGAGTTGATTCCACTTCAGAAGCAAATGAAGGTTATGTACATCTGGATATCGTGAATCCCGAGACGGAGAGCGGAACAGGACCGGACGGGGACACCGCAAGCGTGGTCTCAGACAAGTTAGAGTTCATGAGCAACAGCCAGGAATATCGAGCAGAACGCGATTCACAATCATCACCTCACAAAAAGCACGGCAAAGCGGAAAAGGTCTTGTATTCCAAGGTGAAACACGCTGCTACTCAGAAAGAGGACATCAAGAAGGTGGAAAATACTCCATCTCAGGATACTTCAGCTCAAGATGATGCTGGTTTATTTCGATCTCTGCAACATTCAGTAGCGTGGGGAGCTCAAGGCGGAAAATCAGGATCAGCATTTTTCAAATCATTCGATCGACCGTTACAGATGACCGGTTGTTATGAAGCAGATGTCCGGCAGGAGTTGCAGTGGTTTTCTGAGTTTGCTCCTCATTACTGTCCGCTACAATCAATAAAGCTCTCGATGGAACAGCGACCGACCTTGTTGGCGAAGATCTTGGGTATTTACAGAATTGGTTACAGGAACTCACAGGACGAGCGCAACAATGAGACAAGATGTGCTAGTGATGGAGAAACTTGTTTTATTGACCGGAAAATCGACAAGACTTTTGATTTAAAAGGATCTATGCGGAGCCGTTATGTTCAGACTTCTGGGCTGAAGAATGATGTCCTGTTGGACGAAAATTTACTTGAAATCGGCGCGTCGGGTATGTTATGGACGGGTGGTTCAGTGAGTGGATCAGTGGTTCAGTGGATCAGTGGATCATTGAGAGATGTATTGATCCGTGAATGTCCGATATTTTTCCGGCCACATTCTAAAGCGATTCTCTCCCGTGCGATTCATAACGACACTGAGTTCCTCGCTCAGCAGATGGTTATGGACTACTCCCTCCTTGTCGGCATAGATGAGGCCAGATCTGAACTCGTCACTGGAATCATAGATTTTATCCGAACATTTACTTGGGATAAGAAGCTAGAAATGTATGTGAAAGCGAGTGGTATTCTGGGAGGCCAAGGAAGAATGCCCACCGTTGTGTCCCCAGAGCTGTACAGGACACGCTTCACCGAGGCCATGCACAGGTACTTCCTTATGGTCCCGGACAAATGGACCGGGCTTGGAAATGACCTTGACTGA

Transcript

evm.model.contig_62540.2

ATGGAACTAGCAGCCCAAAGATCAATGTTTCAGAAAGACCAAATGAAGAAGAGCAAGAGCAGAAGGATCAGTTTGTTCCAGCAAGCCCGTTTCATTTCAACAGAAAGGCAAGCAAACATATCAGGCCGAACCATGAACGCTGGAAATCATCAGcAAGTGGACTGTTTAGATCCATATGCTCATCAAAGAATCGCAGTGTTATTCATAAGCTACTCAAATGAATCCAACAACTCGCCACGCCCATGTATAAGTCCATGGGCCGTTTTCATGGAGTTTTATGGACGAAACGACATCACTCTTGGCGGGTTTCTGGAGATATACTGTTTTAGaccgTCATACATCTGCCCCAATCCCAACTGTGACATACCCATGGTAGATCACGTGAGGTACTTTGCGCATGGCACTGGGTCTGTCTACATTCACATGAGGAACCTTGAATCACCTATACCAGGATTCCAACACACTATCCTTACATGGAGCTGGTGCAAGGAATGCAAGCAGGTAACACCAATTGTCCCCCTCTCCCCTGAGGCATGGGCATTGTCCTTTGCTAAGTACCTGGAGCTGAGATTCTATGCGGGAAGTTACAAGCGCCGAGCAAGTGTGGAGCCATGCGGTCACTCACTACATAAGGATCATTATCAATACTTTGCTTATGCTAACATGGTGGCTTCATTCAAGTACCGTCCTATCACACTGTTTGAGATAGCTATCCCTTCTCCACGGATTTATATCAATGAGAAGACCAGGGATGCAAGCTTGTGGATCAATGACCTGCGCGCTATAGCAACAAGAGGAGAGACAGTGTTTGCTgcagtttttgaacggcttgaATCTCTAAAGGATTACTCCACTCAACCGGACCGTCATGTTAAGATAGAGCAGTTTTTTGTAGCACTCGATGAGGAGCATACACGCTTCTTGGAACAAGTTGAAATTGTGGAAAAGAAAGCGGCCAGTCTTCTGGAACCACAGAATCCGCTGGAAACGAAGAGCACGGGCTCATGTGAACACTTGGGCCCTGATGATAGACTGGCACTAGAGTACGTCATAGCAAACAGCTTGAATAGTCTCAAGAAAACCCTATGTGAAGCTGTAGAAAACTGGAATAATACCCTTCAAGAATATTTCCAAGCtgaaaagaagaagaacaacaagTCCATGACGTCGTCCACGAGGGAAGGAAAGTTCATGTCTTCAGTACAACTCGACGGAAAGTTACCGCCAGAACAACCGAGCAAATCGACTGACCTTCTGGGGGTCCGAGGTTTGGACGTGAATCCCCAGGAAGGAAACATCAGCCCCTCCCAGACTCCCTGGGGATCAAGATCACCCTCACCCTACCCCAGCCCTGACATAAATGAAGACTCGCCTGAAGTGTTGTGTGGGCCAGACGTAGAAGTAATGCACGTGACCAGTGGATTTCGACCAATCCAAAGCGCGGAAAAAAACGTCAACACCCCAGCAGACTCCCCCACGGAAGGAATTTTACCTGTGGGAGGGGTCGTTAAGGGACATTCGTTGCCTGGTGCAAAAAATGAGTCTTTAGCAAGGGTCTGTCTTGAGAAGAATCTCACAGAGCTGCAAAGGTCGGAAACCCTCAAggcctttgttgttattgaCGCAAAAAGTGAGAGAGTTCTAGATGGCAGTTTATCAATTGCAAAAGAAAACATACAAGCAGTAGATCTTGGAGGTAAGCGGGAATCTTGTGGAGACAAGATGGACGATGATGCAAAGGAACCTTCCGAGGATAAGAGGGACGGTACAAAGGAGCCTATCGGAGATAGCGTTGGAGGTATAAAGAAACCTTCTGGGGACAAGATGGATGATAACAAATCAAAGGTGTTTTCCACTGAGAATGTAAAGAGCCTGACGCCTGACGGTGTCCTGACTGGAGAAAATGGCCCCTCTGGAGGAATTATGGAGGAGACAAAGCGCAGTTCGTGGTATATCATCGAAGGGTCGAACGGGGAAGAGAAAACAGTTGACAATTGTAATCCTAAAGGTAATGGTGACCTATCTAAAAGTCAGGAACAGCTGTCTACCTCAGGAGAATTAAACCGTGAAGATAAAGGAACAGAGAAGTTTGTCCCTGGGAAGCCTTTCACGTTTGGTCATCGGAGGGTTGCCTCTTCCCCTCCTGTAATTACTGTATCATCAGTTGAGAGCACGTCGTTGCCCGGGGGGGAAATCGCAAGTGGTGTGACTTACCTTGAGAGGAGCCGAAGTGATTCTGATATAAGTATACGAGTCAAACAAGAACTTGACGAGTCTGTGATGACGACAGAAGACGACATTGATGGAAGTGGGAAAATGGGCAACGACAAAACAGCAGAACGCAGCGATACAGAAGGCTCTATTGAAGAACGGAGTATGCCTGATTTCAGAAAAGTGAACACGATACCCAAAGCTCTACACAAAAAGAGTCTTTTTAGGACCCAGTCTGTTGAGGCCACACCGCAGCACCGTTCATCAAAGAAGGTTGTTGCTCGTTCCCAGTCCTGGGCGGTCGTTCAGTGGCAAGCAACAGCTAAGAAGGCTCTTACTACTGAAGGAGGAGACCCGGATTCTACGCCTGCTGCCGACGGATTAACAGGAACAAGCAAGCGTGGTAAAGTGAAGCACATAATCTCATCATTCATGTCCAGCTCAGCTTTTCAACCAGTTGCCTCCACCTTcCCAATTCATGAACACCACCTCCTCCCCCCTGGGGAGAAAGTGCTTGTAGTTGTAAGTGAGAAGGAAACGAGCTCTATCATTGCCTACACACTGAGTACTAAAGAATATAACGAGTGCCTGCATGACATACAGCGGGCCTTGTCAGAAGTTATGAATGGATCAACCAGGGAATTTCTACAGAACAAAAGtGATTTCGGTAAGTCTATTGATGCATCTCTCAAGGGACAGCCACAGGTGGACATTTCTCACGGTTCAGACAAGATTATTAGAGTTGATTCCACTTCAGAAGCAAATGAAGGTTATGTACATCTGGATATCGTGAATCCCGAGACGGAGAGCGGAACAGGACCGGACGGGGACACCGCAAGCGTGGTCTCAGACAAGTTAGAGTTCATGAGCAACAGCCAGGAATATCGAGCAGAACGCGATTCACAATCATCACCTCACAAAAAGCACGGCAAAGCGGAAAAGGTCTTGTATTCCAAGGTGAAACACGCTGCTACTCAGAAAGAGGACATCAAGAAGGTGGAAAATACTCCATCTCAGGATACTTCAGCTCAAGATGATGCTGGTTTATTTCGATCTCTGCAACATTCAGTAGCGTGGGGAGCTCAAGGCGGAAAATCAGGATCAGCATTTTTCAAATCATTCGATCGACCGTTACAGATGACCGGTTGTTATGAAGCAGATGTCCGGCAGGAGTTGCAGTGGTTTTCTGAGTTTGCTCCTCATTACTGTCCGCTACAATCAATAAAGCTCTCGATGGAACAGCGACCGACCTTGTTGGCGAAGATCTTGGGTATTTACAGAATTGGTTACAGGAACTCACAGGACGAGCGCAACAATGAGACAAGATGTGCTAGTGATGGAGAAACTTGTTTTATTGACCGGAAAATCGACAAGACTTTTGATTTAAAAGGATCTATGCGGAGCCGTTATGTTCAGACTTCTGGGCTGAAGAATGATGTCCTGTTGGACGAAAATTTACTTGAAAtcggcgcgtcgggtatgttatggacgggtggttcagtgagtggatcagtggttcagtggatcagtggatcattgagagatgtatTGATCCGTGAATGTCCGATATTTTTCCGGCCACATTCTAAAGCGATTCTCTCCCGTGCGATTCATAACGACACTGAGTTCCTCGCTCAGCAGATGGTTATGGACTACTCCCTCCTTGTCGGCATAGATGAGGCCAGATCTGAACTCGTCACTGGAATCATAGATTTTATCCGAACATTTACTTGGGATAAGAAGCTAGAAATGTATGTGAAAGCGAGTGGTATTCTGGGAGGCCAAGGAAGAATGCCCACCGTTGTGTCCCCAGAGCTGTACAGGACACGCTTCACCGAGGCCATGCACAGGTACTTCCTTATGGTCCCGGACAAATGGACCGGGCTTGGAAATGACCTTGACTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01504 all species →	PIP5K	Phosphatidylinositol-4-phosphate 5-Kinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043548 all species →	Family	1-phosphatidylinositol-3phosphate-5-kinase	Interproscan
IPR027484 all species →	Homologous_superfamily	Phosphatidylinositol-4-phosphate 5-kinase, N-terminal	Interproscan
IPR002498 all species →	Domain	Phosphatidylinositol-4-phosphate 4/5-kinase, core	Interproscan
IPR027483 all species →	Homologous_superfamily	Phosphatidylinositol-4-phosphate 4/5-kinase, C-terminal domain superfamily	Interproscan
IPR044769 all species →	Domain	1-phosphatidylinositol-3-phosphate 5-kinase, PIPK catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46715 all species →	1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000285 all species →	Molecular Function	1-phosphatidylinositol-3-phosphate 5-kinase activity	Interproscan
GO:0012506 all species →	Cellular Component	vesicle membrane	Interproscan
GO:0030593 all species →	Biological Process	neutrophil chemotaxis	Interproscan
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0032438 all species →	Biological Process	melanosome organization	Interproscan
GO:0052810 all species →	Molecular Function	1-phosphatidylinositol-5-kinase activity	Interproscan
GO:0090385 all species →	Biological Process	phagosome-lysosome fusion	Interproscan
GO:1903426 all species →	Biological Process	regulation of reactive oxygen species biosynthetic process	Interproscan
GO:0046488 all species →	Biological Process	phosphatidylinositol metabolic process	Interproscan
GO:0052742 all species →	Molecular Function	phosphatidylinositol kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00921	PIKFYVE, FAB1; 1-phosphatidylinositol-3-phosphate 5-kinase	EC:2.7.1.150	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.