Detailed information of evm.model.contig_62661.1 in Platygyra sinensis

Genomic Location: contig_62661:18170...33062
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008
all species →
EGFEGF-like domainDomainInterproscan
PF13385
all species →
Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF12661
all species →
hEGFHuman growth factor-like EGFDomainInterproscan
PF07699
all species →
Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR018097
all species →
Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152
all species →
PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001759
all species →
FamilyPentraxin-relatedInterproscan
IPR007527
all species →
DomainZinc finger, SWIM-typeInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR009030
all species →
Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013032
all species →
Conserved_siteEGF-like, conserved siteInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR051355
all species →
FamilyNotch and Slit guidance proteinInterproscan
IPR011641
all species →
DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45836
all species →
SLIT HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007219
all species →
Biological ProcessNotch signaling pathwayInterproscan
GO:0007411
all species →
Biological Processaxon guidanceInterproscan
GO:0009986
all species →
Cellular Componentcell surfaceInterproscan
GO:0043235
all species →
Cellular Componentreceptor complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_62661.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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