Detailed information of evm.model.contig_64056.1 in Platygyra sinensis

Genomic Location: contig_64056:310...10214
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11942
all species →		Spt5_NSpt5 transcription elongation factor, acidic N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022581
all species →		DomainSpt5 transcription elongation factor, N-terminalInterproscan
IPR039659
all species →		FamilyTranscription elongation factor SPT5Interproscan
IPR036735
all species →		Homologous_superfamilyNusG, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11125
all species →		SUPPRESSOR OF TY 5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006368
all species →		Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0032044
all species →		Cellular ComponentDSIF complexInterproscan
GO:0032784
all species →		Biological Processregulation of DNA-templated transcription elongationInterproscan
GO:0006354
all species →		Biological ProcessDNA-templated transcription elongationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_64056.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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