Gene detail

Detailed information of evm.model.contig_66507.1 in Platygyra sinensis

Genomic Location: contig_66507:999...6559
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02787 all species →	CPSase_L_D3	Carbamoyl-phosphate synthetase large chain, oligomerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036897 all species →	Homologous_superfamily	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily	Interproscan
IPR005480 all species →	Domain	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain	Interproscan
IPR016185 all species →	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11405 all species →	CARBAMOYLTRANSFERASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004070 all species →	Molecular Function	aspartate carbamoyltransferase activity	Interproscan
GO:0004088 all species →	Molecular Function	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	Interproscan
GO:0004151 all species →	Molecular Function	dihydroorotase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006207 all species →	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan
GO:0006228 all species →	Biological Process	UTP biosynthetic process	Interproscan
GO:0006541 all species →	Biological Process	glutamine metabolic process	Interproscan
GO:0006807 all species →	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0019240 all species →	Biological Process	citrulline biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_66507.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.