Gene detail

Detailed information of evm.model.contig_68256.3 in Platygyra sinensis

Genomic Location: contig_68256:16955...22222
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00348 all species →	polyprenyl_synt	Polyprenyl synthetase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033749 all species →	Conserved_site	Polyprenyl synthetase, conserved site	Interproscan
IPR008949 all species →	Homologous_superfamily	Isoprenoid synthase domain superfamily	Interproscan
IPR000092 all species →	Family	Polyprenyl synthetase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12001 all species →	GERANYLGERANYL PYROPHOSPHATE SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008299 all species →	Biological Process	isoprenoid biosynthetic process	Interproscan
GO:0004659 all species →	Molecular Function	prenyltransferase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006744 all species →	Biological Process	ubiquinone biosynthetic process	Interproscan
GO:1990234 all species →	Cellular Component	transferase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13577	SLC25A10, DIC; solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.