Detailed information of evm.model.contig_69005.6 in Platygyra sinensis

Genomic Location: contig_69005:47740...57548
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004610 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for evm.model.contig_69005.6 in Platygyra sinensis.
 InterPro
InterPro termTypeDescriptionSource
IPR052828
all species →		FamilyNegative elongation factor A domain-containing proteinInterproscan
IPR037517
all species →		DomainHepatitis delta antigen (HDAg) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13328
all species →		NEGATIVE ELONGATION FACTOR A NELF-AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0032021
all species →		Cellular ComponentNELF complexInterproscan
GO:0034244
all species →		Biological Processnegative regulation of transcription elongation by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15179WHSC2, NELFA; negative elongation factor A-Transcription machineryko03021deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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