Detailed information of evm.model.contig_69287.5 in Platygyra sinensis

Genomic Location: contig_69287:28672...44569
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18995
all species →		PRT6_CProteolysis_6 C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039164
all species →		FamilyE3 ubiquitin-protein ligase UBR1-likeInterproscan
IPR044046
all species →		DomainE3 ubiquitin-protein ligase UBR-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21497
all species →		UBIQUITIN LIGASE E3 ALPHA-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071596
all species →		Biological Processubiquitin-dependent protein catabolic process via the N-end rule pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_69287.5.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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