Gene detail

Detailed information of evm.model.contig_70571.4 in Platygyra sinensis

Genomic Location: contig_70571:21283...24475
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04116 all species →	FA_hydroxylase	Fatty acid hydroxylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014430 all species →	Family	Sterol desaturase Scs7	Interproscan
IPR006694 all species →	Domain	Fatty acid hydroxylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12863 all species →	FATTY ACID HYDROXYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0006631 all species →	Biological Process	fatty acid metabolic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0080132 all species →	Molecular Function	fatty acid 2-hydroxylase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0008610 all species →	Biological Process	lipid biosynthetic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_70571.4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.