Gene detail

Detailed information of evm.model.contig_70745.1 in Platygyra sinensis

Genomic Location: contig_70745:390...8356
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.contig_70745.1

ATGAAGTCTTTTTTGAAGTACTCCAGCCTGTGTAGGAAGAGTGGTCGACTGGCTCTAAGCCACAAGACTCTTGTCATGCTGCTTGGAACAGATCCATCCAAACAACCCGATCAACCTTTACCAACTACCTACCCACAAGTCACGTTCGCCTACATGAAACATATGTGGAGAGAAAATAAGAAGGATGAAGCTTTTAAGCATCTCCAGCACTTTGTGCAAAGCACGTTAAACCAGCAGGCATTGCAGTCACTGTCTCCAACAGATGATGGACAGAAGAGGGAGGAGCTCCTCAAACTCGTTGCCAGATGTTATCTGAAGCTGGGAGATTGGCAGACAGCTCTTCAGGGATACAGCGAGACGTCTATACCACAAATTCTGCAATATTACGCTGCAGCCACGGACAATGACAGGAACTGTTACAAGGCGTGGCATGCTTGGGCTTACATGAACTTTGAAACAGTGTTGTACTATAAAAGCCAGCAGTCATCTGGAGCTGATGGTGCTAATAATGGCAACATCTGCAGGACTCCTCCTCCTGTACAGACATCTTCTACTCTTTACGAAGCCGTTACTGGTCTTCAAAAGCAAGATAACGGATTTTTTATCGTTATTTATTACAGACTGTTAATATTGTGGTTTGACTATGGTCATTGGTCCGAAGTCTATGAGGCCCTTGTTGAAGGAATCAAAACAATTCAGATTGACACATGGCTGCAGGTTATCCCGCAACTTATCGCCAGAATTGACACTCCTCGTCAACTTGTTGGACGGCTTATTCATCAGCTTCTAACAGATATCGGCAAACATCATCCACAGGCCTTGATCTATCCACTGACTGTGGCTTCAAAGTCAGCCAGCAGTGCTCGTCGCAATGCAGCCAATCAGATCCTAAAGAACATGGGTGAACACAGTCAACAGCTCGTACAGCAGGCAGTCATGGTCAGTGATGAACTCATCCGAGTCGCCATCTTGTGGCATGAGTTGTGGCACGAAGGACTTGAAGAAGCATCAAGACTTTACTTCAGCGAAGGTAACGTGAAAGGAATGCTTGGTGCGTTAGAACCGCTGCATCAGATGATGGAGAGAGGACCACAGACCCTTAAAGAGACTTCATTTAACCAGGCATATGGTCGCGATCTGATGGAAGCCCAGGAATGGTGCAGAAAGTATCAACGATCAGGAAATGTCAAAGATCTCACTCAGGCCTGGGATTTGTACTACTTGGTTTTCAGACGAATCTCCAAACAACTCCCACAGTTGACGTCTCTAGAGCTTCAGTATGTTTCACCCAAGCTACTGATGTGTCGTGACTTAGAGCTTGCTGTGCCTGGAACATACGAACCCCACAAACCAGTGATCCACATTAGACATGTACATGCTTCACTTAACGTCATCACATCGAAACAAAGACCCAGAAAACTCTGTATTACTGGTGAGTGTGACCCAGAAGACTTTGTTTTACTGGTGAGGAGCAATGGTTCGGAGTTTATGTTCCTGTTGAAAGGTCATGAAGATTTGCGCCAAGACGAGCGAGTTATGCAGCTGTTTGGTTTGGTGAATACACTGTTAGCTGGAGATCAAGAAACTTCTAAGAGACATCTGGGAATTCAGCGTTACGCAGTTATCCCTCTGTCGACAAACTCAGGTCTGCTGGGCTGGGTTCCTCATTCCGACACACTGCATACACTCATCCGGGACTACAGAGAAAAGAAAAAGATTCTCCTCAACATCGAACATCGCATCATGCTGAGAATGGCTCCAGACTATGACCATTTGACTCTAATGCAGAAAGTGGAGGTGTTTGAACATGCGCTATCCAACACTAATGGAGATGACCTGGCTAAACTACTATGGCTCAAGAGTCCAAGCTCAGAGGTTTGGTTTGATCGTCGAACGAACTATACTCGATCTCTGGCTGTTATGTCCATGGTGGGATATGTGCTGGGCCTTGGAGACAGGCATCCATCTAACTTGATGCTGGATCGCTTAAGCGGAAAAATCCTCCATATCGATTTTGGGGATTGTTTCGAGGTTGCGATGACCAGAGAGAAGTTTCCAGAGAAAATTCCATTTCGACTCACAAGAATGTTGACTAATGCAATGGAGGTACATCTAGTGATTCTGATACTGGTATTTGTTTTGAGTGCAGGTGCATTAGCACATGCTTACAAAAAACAGCAACAACAACAACAACAACAATAA

Transcript

evm.model.contig_70745.1

atgaagtcttttttgaagTACTCCAGCCTGTGTAGGAAGAGTGGTCGACTGGCTCTAAGCCACAAGACTCTTGTCATGCTGCTTGGAACAGATCCATCCAAACAACCCGATCAACCTTTACCAACTACCTACCCACAAGTCACGTTCGCCTACATGAAACATATGTGGAGAGAAAATAAGAAGGATGAAGCTTTTAAGCATCTCCAGCACTTTGTGCAAAGCACGTTAAACCAGCAGGCATTGCAGTCACTGTCTCCAACAGATGATGGACAGAAGAGGGAGGAGCTCCTCAAACTCGTTGCCAGATGTTATCTGAAGCTGGGAGATTGGCAGACAGCTCTTCAGGGATACAGCGAGACGTCTATACCACAAATTCTGCAATATTACGCTGCAGCCACGGACAATGACAGGAACTGTTACAAGGCGTGGCATGCTTGGGCTTACATGAACTTTGAAACAGTGTTGTACTATAAAAGCCAGCAGTCATCTGGAGCTGATGGTGCTAATAATGGCAACATCTGCAGGACTCCTCCTCCTGTACAGACATCTTCTACTCTTTACGAAGCCGTTACTGGTCTTCAAAAGCAAGATAACGGATTTTTTATCGTTATTTATTACAGACTGTTAATATTGTGGTTTGACTATGGTCATTGGTCCGAAGTCTATGAGGCCCTTGTTGAAGGAATCAAAACAATTCAGATTGACACATGGCTGCAGGTTATCCCGCAACTTATCGCCAGAATTGACACTCCTCGTCAACTTGTTGGACGGCTTATTCATCAGCTTCTAACAGATATCGGCAAACATCATCCACAGGCCTTGATCTATCCACTGACTGTGGCTTCAAAGTCAGCCAGCAGTGCTCGTCGCAATGCAGCCAATCAGATCCTAAAGAACATGGGTGAACACAGTCAACAGCTCGTACAGCAGGCAGTCATGGTCAGTGATGAACTCATCCGAGTCGCCATCTTGTGGCATGAGTTGTGGCACGAAGGACTTGAAGAAGCATCAAGACTTTACTTCAGCGAAGGTAACGTGAAAGGAATGCTTGGTGCGTTAGAACCGCTGCATCAGATGATGGAGAGAGGACCACAGACCCTTAAAGAGACTTCATTTAACCAGGCATATGGTCGCGATCTGATGGAAGCCCAGGAATGGTGCAGAAAGTATCAACGATCAGGAAATGTCAAAGATCTCACTCAGGCCTGGGATTTGTACTACTTGGTTTTCAGACGAATCTCCAAACAACTCCCACAGTTGACGTCTCTAGAGCTTCAGTATGTTTCACCCAAGCTACTGATGTGTCGTGACTTAGAGCTTGCTGTGCCTGGAACATACGAACCCCACAAACCAGTGATCCACATTAGACATGTACATGCTTCACTTAACGTCATCACATCGAAACAAAGACCCAGAAAACTCTGTATTACTGGTGAGTGTGACCCAGAAGACTTTGTTTTACTGGTGAGGAGCAATGGTTCGGAGTTTATGTTCCTGTTGAAAGGTCATGAAGATTTGCGCCAAGACGAGCGAGTTATGCAGCTGTTTGGTTTGGTGAATACACTGTTAGCTGGAGATCAAGAAACTTCTAAGAGACATCTGGGAATTCAGCGTTACGCAGTTATCCCTCTGTCGACAAACTCAGGTCTGCTGGGCTGGGTTCCTCATTCCGACACACTGCATACACTCATCCGGGACtacagagaaaagaaaaagattcTCCTCAACATCGAACATCGCATCATGCTGAGAatggcTCCAGACTATGACCATTTGACTCTAATGCAGAAAGTGGAGGTGTTTGAACATGCGCTATCCAACACTAATGGAGATGACCTGGCTAAACTACTATGGCTCAAGAGTCCAAGCTCAGAGGTTTGGTTTGATCGTCGAACGAACTATACTCGATCTCTGGCTGTTATGTCCATGGTGGGATATGTGCTGGGCCTTGGAGACAGGCATCCATCTAACTTGATGCTGGATCGCTTAAGCGGAAAAATCCTCCATATCGATTTTGGGGATTGTTTCGAGGTTGCGATGACCAGAGAGAAGTTTCCAGAGAAAATTCCATTTCGACTCACAAGAATGTTGACTAATGCAATGGAGGTACATCTAGTGATTCTGATACTGGTATTTGTTTTGAGTGCAGGTGCATTAGCACATGCTTacaaaaaacagcaacaacaacaacaacaacaataa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00454 all species →	PI3_PI4_kinase	Phosphatidylinositol 3- and 4-kinase	Family	Interproscan
PF08771 all species →	FRB_dom	FKBP12-rapamycin binding domain	Domain	Interproscan
PF02259 all species →	FAT	FAT domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000403 all species →	Domain	Phosphatidylinositol 3-/4-kinase, catalytic domain	Interproscan
IPR018936 all species →	Conserved_site	Phosphatidylinositol 3/4-kinase, conserved site	Interproscan
IPR026683 all species →	Domain	Serine/threonine-protein kinase TOR, catalytic domain	Interproscan
IPR036738 all species →	Homologous_superfamily	FKBP12-rapamycin binding domain superfamily	Interproscan
IPR050517 all species →	Family	DNA Damage Response and Repair Kinase	Interproscan
IPR014009 all species →	Domain	PIK-related kinase	Interproscan
IPR009076 all species →	Domain	FKBP12-rapamycin binding domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR003151 all species →	Domain	PIK-related kinase, FAT	Interproscan
IPR036940 all species →	Homologous_superfamily	Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11139 all species →	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0044877 all species →	Molecular Function	protein-containing complex binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0016242 all species →	Biological Process	negative regulation of macroautophagy	Interproscan
GO:0031929 all species →	Biological Process	TOR signaling	Interproscan
GO:0031931 all species →	Cellular Component	TORC1 complex	Interproscan
GO:0031932 all species →	Cellular Component	TORC2 complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_70745.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.