Gene detail

Detailed information of evm.model.contig_70994.3 in Platygyra sinensis

Genomic Location: contig_70994:11674...25499
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03364 all species →	Polyketide_cyc	Polyketide cyclase / dehydrase and lipid transport	Family	Interproscan
PF12799 all species →	LRR_4	Leucine Rich repeats (2 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044996 all species →	Family	Coenzyme Q-binding protein COQ10-like	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR005031 all species →	Domain	Coenzyme Q-binding protein COQ10, START domain	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR025875 all species →	Repeat	Leucine rich repeat 4	Interproscan
IPR023393 all species →	Homologous_superfamily	START-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12901 all species →	SPERM PROTEIN HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0045333 all species →	Biological Process	cellular respiration	Interproscan
GO:0048039 all species →	Molecular Function	ubiquinone binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_70994.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.