Detailed information of evm.model.contig_72724.2 in Platygyra sinensis

Genomic Location: contig_72724:6637...24942
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005039 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05817
all species →		Ribophorin_IIOligosaccharyltransferase subunit Ribophorin IIFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008814
all species →		FamilyDolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12640
all species →		RIBOPHORIN IIInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006487
all species →		Biological Processprotein N-linked glycosylationInterproscan
GO:0008250
all species →		Cellular Componentoligosaccharyltransferase complexInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12667RPN2, SWP1; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)-Protein processing in endoplasmic reticulumko04141deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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