Gene detail

Detailed information of evm.model.contig_72778.6 in Platygyra sinensis

Genomic Location: contig_72778:55038...56639
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00397 all species →	WW	WW domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan
IPR001202 all species →	Domain	WW domain	Interproscan
IPR051583 all species →	Family	Yes-associated protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17616 all species →	YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0035329 all species →	Biological Process	hippo signaling	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16687	YAP1, Yki; transcriptional coactivator YAP1	-	Hippo signaling pathway - multiple species	ko04392	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.