Gene detail

Detailed information of evm.model.contig_72999.1 in Platygyra sinensis

Genomic Location: contig_72999:6516...12375
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00062 all species →	Lys	C-type lysozyme/alpha-lactalbumin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023346 all species →	Homologous_superfamily	Lysozyme-like domain superfamily	Interproscan
IPR001916 all species →	Family	Glycoside hydrolase, family 22	Interproscan
IPR019799 all species →	Domain	Glycoside hydrolase family 22 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11407 all species →	LYSOZYME C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003796 all species →	Molecular Function	lysozyme activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13915	LYZ; lysozyme C	EC:3.2.1.17	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.