Gene detail

Detailed information of evm.model.contig_74799.2 in Platygyra sinensis

Genomic Location: contig_74799:17893...28010
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02911 all species →	Formyl_trans_C	Formyl transferase, C-terminal domain	Domain	Interproscan
PF00551 all species →	Formyl_trans_N	Formyl transferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044135 all species →	Domain	Methionyl-tRNA formyltransferase, C-terminal domain	Interproscan
IPR011034 all species →	Homologous_superfamily	Formyl transferase-like, C-terminal domain superfamily	Interproscan
IPR005793 all species →	Domain	Formyl transferase, C-terminal	Interproscan
IPR041711 all species →	Domain	Methionyl-tRNA formyltransferase, N-terminal domain	Interproscan
IPR036477 all species →	Homologous_superfamily	Formyl transferase, N-terminal domain superfamily	Interproscan
IPR002376 all species →	Domain	Formyl transferase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11138 all species →	METHIONYL-TRNA FORMYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0004479 all species →	Molecular Function	methionyl-tRNA formyltransferase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0071951 all species →	Biological Process	conversion of methionyl-tRNA to N-formyl-methionyl-tRNA	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00604	MTFMT, fmt; methionyl-tRNA formyltransferase	EC:2.1.2.9	Aminoacyl-tRNA biosynthesis	ko00970	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.