Gene detail

Detailed information of evm.model.contig_75427.1 in Platygyra sinensis

Genomic Location: contig_75427:106...12956
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.contig_75427.1

ATGACCAGATTGCTGGAGAGAATCAAGGTCCTTGGTGCGTCTGTAATTGATGAAGCAAATGAAACACTGCCAAATTTGGATGAATTTGCTTGTCAACTGGAGGGTATAAGAGTGATTACAGAACTCATGGTTCACCTTTGTAGTCATCAGACAAGAAACTCCAATGCCGGGAACCCAAGTGAAGTTGAAGAATTTTTCACAAGCTTGGGTCTGTCCCACCTCTTCTCTGTACTTAAATCATCCCTCCAGATCTTGGTTCAAATTGCTGAGCAGTCTCCACGGACAACAGACACTTTCACTGCCCTCGATTCATCCTTCCAAAAACTTGTTCACACTACAGGGGCACTTTACTGCATATCAGATTCCATTCATTTGCCACTCGATTTATGTCAGTTCATCATATTTTTGGCGTCCATCCCTTGGCTGGCGAGATGTGACCCACCCTGGATTGATCTACCTCATGGGTTTGGTCTGTCAGTTGATAGCATGGCTAGAGTTGGAAGGTCACTTGGTCCTGTCATGGGCAATGAGAGCAAGGCTGTTTGTCTGCATTTGCTGGCAGCACTAGATGCAGCACCAACATGGAGGACCCAAGTTTTCCTGTTAGTTCTGAAGAAGGACACTGCCAATGACACAAAAATAGCAGCCCTAAAGCAGCTTCCTCTTTTGCTGTGTTCTCTTGGTTCATTTTCATTCCACTTGATCTCAGATGTTCTTCCTGGGCTTCTTTCCTGTGGTGAAGCAGTTCAGGTGGAAATTGCCAAAGTTATTGGCTCATTGGCTTGTGTACTTACAGAGAATACAGTGATAAGGAAGTTGAAGCAGGAGTTGTCTTTTGATGGTCCTGTTTGTAGCTGTATCACATTTCTCTGCCCTGACTGTGATCCTAATTTTCGAAACAAAACAGGTAATGACGAGGAAAGTAAACTCAATGCCATTGTTAATGCTGCAATATTCACTCAATACCTACAACTTCTATCTCCCGATACAAACCCTGCCATTAAATGTGCCTTTATCAATAGTATGAAGAGAATGTTCACTCACATAGCATTTACAGCTGACTATGCAGCTCATAGTTCCATTGTAAGTGCAACATGTTTTGATCTTATTGAGGACCCAGACTTTGATGTGAGAATGGCTTTCAGCAATGTAGTTCCGTACATTGTCAAAGGGAAAGCAGATTCAAATGACAACATGCAACACACTGTCATTTCCAAGTTGAAGAAAGTGTTTGTCGAAGCTTCCTCACAAGGCAACTGCAAACTTCAGGAAACTGTTGTTTTGACAATTGGACGGCTTGGAAGAATTGCTGAAGGAGAACTGCTGCTGGTGGTGATTGTCAGTTTGTTGGAAAGTCTCACTGCGCACTCGCAGCTTATAAGAGCCGTCGCCTTCAAACAGGTTCAAGAAGTGGCTAAGTTCCAAGGCAAACAGCTGAAGGATTTATTTGCTGGGTTTAAGCAGTCAATTTGTAAATTTGTAGTGGATGCAATTGATAGGATTCAGAGCCAGAACCCTGCCGCAAAAGTGTCTTTGGATGTTGTGTCAGAAGTTGCGAGTGTGTTTGAATTCAGAGATGTGCACTCCTTTTTGAAGAGTACATTGCGTTTTGTCATCCCCTACCTTGTCAAGAAAGCTTCACCTTCTTCATCAGCAATCTTACGACATATTGCAAAAGAGCTGAAGATGAACAGGAGGGAGATGTTACTGGAGAACTTCAAGTTCATCTTTTCTTTCCTTGTGAGATCATGTTCACCATCCGAGCTGGAGAAAGCTCTTGGCTATGTCCAGAAAGAGACAGACGTAGAGCTTGGCAGCCTCTTACGATCCGAAGCCCAGAGTGTCTACAATCAGCTATTGTTGTATCTGAGTGTCAGTTACAACAAAGTGTTCAGTGGACTGGCAATGCTAGCTTCAAAGGATGATACATACACTGGGCCAAAGGATCTACAAACCACGCAGCATCTGGCAAATTTTCTGCAATCCAGGCTGCTTGGCATCCTTGCTTTCTACAACACTGTTCTCCTCACGAACAGTGATTTGGAAGAAAAGAGATTAGCTCTAGAAAGCCTCACCAAGCTCATGCAGGTGATGGGACGAAAGTTCATTACCACCGTACGAGTCAAAGTCATGGGAATCCTGCGACTGTGTTTGAGATTCCAGGACAAGGGATTCCCCGAGCTGTCTTGTGATGCATGGGAGAGTTTTGTGCGAAATGTTGAACTGTCCAGTCTTGGTCCGATGCTGAGCCAGATCGTGGTTACCCTTTTGCCATACCTTAACAAACTTCCTGCCAGAGTCACACAGATTTTCCACTTTCTGATTGTAGAAAACAAATCATCTCTGCAGGATTACTTCCATGAGATCTACTTTCTTCCTGACATCCCAGAACTTCGAAGGGTTAGTGCTGTCCTCAGATCTTGCAGTGGGAAAGCTTCTAAAAAGATGGACTTACAAGCTCAGCTGAGGCAGTCTCTAAAAGGCATTTCTCATGAAAGTGCTGATGTGCAAAGACATGCTTTATCGAAGCTCAAACAGTTACTTCATGATAACCAGGCTACTCTGCATGGTTATGTCCTCAGTAATGAAACAGTTGATCCTATTATCCCGCAGCTTATCAATGCGCTTATGTCGAGCTGTCGTGTGACTGACTCTGAAGCCAAAATACTTGTGGCAGAATGTCTTGGTGAGCTTGGTGCAGTGGATCCTGGCAGACTGGATAAGCTGACAAATAAACCGGTGGATGAGCAGACAGTGTTTGAGAGTGGTTGTGATGATGTGCAGTTTGCTGTGGAGCTTATTAATCAACTGGTTCAAGCATTCCTTGCTGCTCATGATACAAGAGCACAG

Transcript

evm.model.contig_75427.1

ATGACCAGATTGCTGGAGAGAATCAAGGTCCTTGGTGCGTCTGTAATTGATGAAGCAAATGAAACACTGCCAAATTTGGATGAATTTGCTTGTCAACTGGAGGGTATAAGAGTGATTACAGAACTCATGGTTCACCTTTGTAGTCATCAGACAAGAAACTCCAATGCCGGGAACCCAAGTGAAGTTGAAGAATTTTTCACAAGCTTGGGTCTGTCCCACCTCTTCTCTGTACTTAAATCATCCCTCCAGATCTTGGTTCAAATTGCTGAGCAGTCTCCACGGACAACAGACACTTTCACTGCCCTCGATTCATCCTTCCAAAAACTTGTTCACACTACAGGGGCACTTTACTGCATATCAGATTCCATTCATTTGCCACTCGATTTATGTCAGTTCATCATATTTTTGGCGTCCATCCCTTGGCTGGCGAGATGTGACCCACCCTGGATTGATCTACCTCATGGGTTTGGTCTGTCAGTTGATAGCATGGCTAGAGTTGGAAGGTCACTTGGTCCTGTCATGGGCAATGAGAGCAAGGCTGTTTGTCTGCATTTGCTGGCAGCACTAGATGCAGCACCAACATGGAGGACCCAAGTTTTCCTGTTAGTTCTGaagaaGGACACTGCCAATGACACAAAAATAGCAGCCCTAAAGCAGCTTCCTCTTTTGCTGTGTTCTCTTGGTTCATTTTCATTCCACTTGATCTCAGATGTTCTTCCTGGGCTTCTTTCCTGTGGTGAAGCAGTTCAGGTGGAAATTGCCAAAGTTATTGGCTCATTGGCTTGTGTACTTACAGAGAATACAGTGATAAGGAAGTTGAAGCAGGAGTTGTCTTTTGATGGTCCTGTTTGTAGCTGTATCACATTTCTCTGCCCTGACTGTGATCCTAATTTTCGAAACAAAACAGGTAATGACGAGGAAAGTAAACTCAATGCCATTGTTAATGCTGCAATATTCACTCAATACCTACAACTTCTATCTCCCGATACAAACCCTGCCATTAAATGTGCCTTTATCAATAGTATGAAGAGAATGTTCACTCACATAGCATTTACAGCTGACTATGCAGCTCATAGTTCCATTGTAAGTGCAACATGTTTTGATCTTATTGAGGACCCAGACTTTGATGTGAGAATGGCTTTCAGCAATGTAGTTCCGTACATTGTCAAAGGGAAAGCAGATTCAAATGACAACATGCAACACACTGTCATTTCCAAGTTGAAGAAAGTGTTTGTCGAAGCTTCCTCACAAGGCAACTGCAAACTTCAGGAAACTGTTGTTTTGACAATTGGACGGCTTGGAAGAATTGCTGAAGGAGAACTGCTGCTGGTGGTGATTGTCAGTTTGTTGGAAAGTCTCACTGCGCACTCGCAGCTTATAAGAGCCGTCGCCTTCAAACAGGTTCAAGAAGTGGCTAAGTTCCAAGGCAAACAGCTGAAGGATTTATTTGCTGGGTTTAAGCAGtcaatttgtaaatttgtagtgGATGCAATTGATAGGATTCAGAGCCAGAACCCTGCCGCAAAAGTGTCTTTGGATGTTGTGTCAGAAGTTGCGAGTGTGTTTGAATTCAGAGATGTGCACTCCTTTTTGAAGAGTACATTGCGTTTTGTCATCCCCTACCTTGTCAAGAAAGCTTCACCTTCTTCATCAGCAATCTTACGACATATTGCAAAAGAGCTGAAGATGAACAGGAGGGAGATGTTACTGGAGAACTTCAAGTTCATCTTTTCTTTCCTTGTGAGATCATGTTCACCATCCGAGCTGGAGAAAGCTCTTGGCTATGTCCAGAAAGAGACAGACGTAGAGCTTGGCAGCCTCTTACGATCCGAAGCCCAGAGTGTCTACAATCAGCTATTGTTGTATCTGAGTGTCAGTTACAACAAAGTGTTCAGTGGACTGGCAATGCTAGCTTCAAAGGATGATACATACACTGGGCCAAAGGATCTACAAACCACGCAGCATCTGGCAAATTTTCTGCAATCCAGGCTGCTTGGCATCCTTGCTTTCTACAACACTGTTCTCCTCACGAACAGTGATTTGGAAGAAAAGAGATTAGCTCTAGAAAGCCTCACCAAGCTCATGCAGGTGATGGGACGAAAGTTCATTACCACCGTACGAGTCAAAGTCATGGGAATCCTGCGACTGTGTTTGAGATTCCAGGACAAGGGATTCCCCGAGCTGTCTTGTGATGCATGGGAGAGTTTTGTGCGAAATGTTGAACTGTCCAGTCTTGGTCCGATGCTGAGCCAGATCGTGGTTACCCTTTTGCCATACCTTAACAAACTTCCTGCCAGAGTCACACAGATTTTCCACTTTCTGATTGTAGAAAACAAATCATCTCTGCAGGATTACTTCCATGAGATCTACTTTCTTCCTGACATCCCAGAACTTCGAAGGGTTAGTGCTGTCCTCAGATCTTGCAGTGGGAAAGCTTCTAAAAAGATGGACTTACAAGCTCAGCTGAGGCAGTCTCTAAAAGGCATTTCTCATGAAAGTGCTGATGTGCAAAGACATGCTTTATCGAAGCTCAAACAGTTACTTCATGATAACCAGGCTACTCTGCATGGTTATGTCCTCAGTAATGAAACAGTTGATCCTATTATCCCGCAGCTTATCAATGCGCTTATGTCGAGCTGTCGTGTGACTGACTCTGAAGCCAAAATACTTGTGGCAGAATGTCTTGGTGAGCTTGGTGCAGTGGATCCTGGCAGACTGGATAAGCTGACAAATAAACCGGTGGATGAGCAGACAGTGTTTGAGAGTGGTTGTGATGATGTGCAGTTTGCTGTGGAGCTTATTAATCAACTGGTTCAAGCATTCCTTGCTGCTCATGATACAAGAGCACAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08064 all species →	UME	UME (NUC010) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR012993 all species →	Domain	UME domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR050517 all species →	Family	DNA Damage Response and Repair Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11139 all species →	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0000077 all species →	Biological Process	DNA damage checkpoint signaling	Interproscan
GO:0000723 all species →	Biological Process	telomere maintenance	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_75427.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.