Detailed information of evm.model.contig_75718.2 in Platygyra sinensis

Genomic Location: contig_75718:29055...40408
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10366
all species →		Vps39_1Vacuolar sorting protein 39 domain 1RepeatInterproscan
PF10367
all species →		Vps39_2Vacuolar sorting protein 39 domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000547
all species →		RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR032914
all species →		FamilyVam6/VPS39/TRAP1 familyInterproscan
IPR019452
all species →		DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1Interproscan
IPR019453
all species →		DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12894
all species →		CNH DOMAIN CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006914
all species →		Biological ProcessautophagyInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0034058
all species →		Biological Processendosomal vesicle fusionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_75718.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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