Detailed information of evm.model.contig_75871.4 in Platygyra sinensis

Genomic Location: contig_75871:25781...33542
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan
PF12947
all species →		EGF_3EGF domainDomainInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR024731
all species →		DomainEGF domainInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR050541
all species →		FamilyLeucine-rich repeat and transmembrane domain-containing proteinInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000483
all species →		DomainCysteine-rich flanking region, C-terminalInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24369
all species →		ANTIGEN BSP, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_75871.4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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