Gene detail

Detailed information of evm.model.contig_76050.4 in Platygyra sinensis

Genomic Location: contig_76050:17955...24186
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08797 all species →	HIRAN	HIRAN domain	Domain	Interproscan
PF05995 all species →	CDO_I	Cysteine dioxygenase type I	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010300 all species →	Family	Cysteine dioxygenase type I	Interproscan
IPR014905 all species →	Domain	HIRAN domain	Interproscan
IPR011051 all species →	Homologous_superfamily	RmlC-like cupin domain superfamily	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12918 all species →	CYSTEINE DIOXYGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0008198 all species →	Molecular Function	ferrous iron binding	Interproscan
GO:0016702 all species →	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Interproscan
GO:0017172 all species →	Molecular Function	cysteine dioxygenase activity	Interproscan
GO:0019448 all species →	Biological Process	L-cysteine catabolic process	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0016818 all species →	Molecular Function	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_76050.4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.