Detailed information of evm.model.contig_76806.1 in Platygyra sinensis

Genomic Location: contig_76806:668...5605
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16415
all species →		CNOT1_CAF1_bindCCR4-NOT transcription complex subunit 1 CAF1-binding domainRepeatInterproscan
PF16417
all species →		CNOT1_TTP_bindCCR4-NOT transcription complex subunit 1 TTP binding domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032191
all species →		DomainCCR4-NOT transcription complex subunit 1, CAF1-binding domainInterproscan
IPR032193
all species →		DomainCCR4-NOT transcription complex subunit 1, TTP binding domainInterproscan
IPR038535
all species →		Homologous_superfamilyCCR4-NOT subunit 1, TTP binding domain superfamilyInterproscan
IPR040398
all species →		FamilyCCR4-NOT transcription complex subunit 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13162
all species →		CCR4-NOT TRANSCRIPTION COMPLEXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000288
all species →		Biological Processnuclear-transcribed mRNA catabolic process, deadenylation-dependent decayInterproscan
GO:0000932
all species →		Cellular ComponentP-bodyInterproscan
GO:0017148
all species →		Biological Processnegative regulation of translationInterproscan
GO:0030015
all species →		Cellular ComponentCCR4-NOT core complexInterproscan
GO:0060090
all species →		Molecular Functionmolecular adaptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_76806.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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