Detailed information of evm.model.contig_76927.1 in Platygyra sinensis

Genomic Location: contig_76927:9380...17376
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06003
all species →		SMN_TudorSurvival motor neuron protein (SMN), Tudor domainDomainInterproscan
PF20636
all species →		SMN_G2-BDSurvival Motor Neuron, Gemin2-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047298
all species →		DomainSurvival motor neuron protein, Tudor domain, eumetazoaInterproscan
IPR002999
all species →		DomainTudor domainInterproscan
IPR010304
all species →		DomainSurvival motor neuron, Tudor domainInterproscan
IPR040424
all species →		FamilySMN complex subunit Smn1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR39267
all species →		SURVIVAL MOTOR NEURON-LIKE PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006397
all species →		Biological ProcessmRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_76927.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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