Detailed information of evm.model.contig_77455.1 in Platygyra sinensis

Genomic Location: contig_77455:1027...17594
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20826
all species →
PHD_5PhD finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002999
all species →
DomainTudor domainInterproscan
IPR013087
all species →
DomainZinc finger C2H2-typeInterproscan
IPR001965
all species →
DomainZinc finger, PHD-typeInterproscan
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR016197
all species →
Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR043449
all species →
FamilyPHD finger protein 20-likeInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786
all species →
Conserved_siteZinc finger, PHD-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15856
all species →
PHD FINGER PROTEIN 20-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016573
all species →
Biological Processobsolete histone acetylationInterproscan
GO:0044545
all species →
Cellular ComponentNSL complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_77455.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP