Detailed information of evm.model.contig_78696.3 in Platygyra sinensis

Genomic Location: contig_78696:13595...24676
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21091
all species →		SPT16_CFACT complex subunit SPT16, C-terminal domainDomainInterproscan
PF08644
all species →		SPT16FACT complex subunit (SPT16/CDC68)DomainInterproscan
PF08512
all species →		Rttp106-like_middleHistone chaperone Rttp106-like, middle domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048969
all species →		DomainFACT complex subunit SPT16, C-terminal domainInterproscan
IPR040258
all species →		FamilyFACT complex subunit Spt16Interproscan
IPR013953
all species →		DomainFACT complex subunit Spt16 domainInterproscan
IPR013719
all species →		DomainHistone chaperone RTT106/FACT complex subunit SPT16-like, middle domainInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13980
all species →		CDC68 RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006368
all species →		Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0031491
all species →		Molecular Functionnucleosome bindingInterproscan
GO:0035101
all species →		Cellular ComponentFACT complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_78696.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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