Gene detail

Detailed information of evm.model.contig_79916.1 in Platygyra sinensis

Genomic Location: contig_79916:82...6921
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09468 all species →	RNase_H2-Ydr279	Ydr279p protein family (RNase H2 complex component) wHTH domain	Domain	Interproscan
PF17745 all species →	Ydr279_N	Ydr279p protein triple barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019024 all species →	Domain	Ribonuclease H2 subunit B, wHTH domain	Interproscan
IPR041195 all species →	Domain	Rnh202, triple barrel domain	Interproscan
IPR040456 all species →	Family	Ribonuclease H2 subunit B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13383 all species →	RIBONUCLEASE H2 SUBUNIT B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0032299 all species →	Cellular Component	ribonuclease H2 complex	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0006401 all species →	Biological Process	RNA catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06691	RPN13; 26S proteasome regulatory subunit N13	-	Proteasome	ko03051	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.