Detailed information of evm.model.contig_80022.1 in Platygyra sinensis

Genomic Location: contig_80022:11772...21151
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20659
all species →		MS_CMalate synthase, C-terminalDomainInterproscan
PF01274
all species →		MS_TIM-barrelMalate synthase, TIM barrel domainDomainInterproscan
PF20656
all species →		MS_NMalate synthase, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011076
all species →		Homologous_superfamilyMalate synthase superfamilyInterproscan
IPR048355
all species →		DomainMalate synthase, C-terminal domainInterproscan
IPR044856
all species →		Homologous_superfamilyMalate synthase, C-terminal superfamilyInterproscan
IPR001465
all species →		DomainMalate synthase, TIM barrel domainInterproscan
IPR006252
all species →		FamilyMalate synthase AInterproscan
IPR046363
all species →		Homologous_superfamilyMalate synthase, N-terminal and TIM-barrel domainsInterproscan
IPR048356
all species →		DomainMalate synthase, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42902
all species →		MALATE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0004474
all species →		Molecular Functionmalate synthase activityInterproscan
GO:0006097
all species →		Biological Processglyoxylate cycleInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_80022.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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