Gene detail

Detailed information of evm.model.contig_80276.1 in Platygyra sinensis

Genomic Location: contig_80276:2574...9106
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.contig_80276.1

ATGTTGGCATCACCATTTCTCGCGGCCATGAGAAATGTGATTTCCTTAAAGGTCAGCCCAGCCCATCAGTCTTCACAAACCTTGATAATTGGCAAACCAGGTGAAATTCATTGTGGGATTGAAGGAAAGGCAGCTCAAGTCTTATGGCGCAAAGTTGGCATGAAGCATCGCCTTGTTTATTCAAGAGTGAGATCTTTCAATTCTAAAACTCTTCGTTTCCGTCGTGTACAGGAGCAAGATTCAGGGAAATATGTGTGTCGGGCTATTTCAATGTCTGCAACTGTGACGGCTACCATAAATGTTTCTGTTGAGGCTGCTAAGGTTCCAAAGCCAGGGGACACAAGTGTGGCATCAAACCTTGTGTGCAATTTGGAAAAGCTTGTTGGTACTGGAAGTGATCCAGCTAAATTTTCACCTCGCTGGTATTTTGACAGCAAAGGGTCACATATGTGTGAATCATTTCTCTACAGTGGCAGTGGTGGCAATGAAAACAATTTTAAAACCAAAGCTGTTTGCATCCAAAAGTGCTCCCATGCAGCTGGTGATGTTTGTGGTCTCCCCAAACAGCCTGGGATGTGTATGGGCTATTTTCAAAAATGGTTCTATAGTCCCCAAACTGGAGAATGTGAGTTTTTTATTTATGGTGGTTGCCAAGGAAATGCAAACAACTTTAATTCCGAGGAGGAGTGTGAAGAGGCTTGTTCAGCTGATGTTGTTTGCAAATTTCAACCAGAAGTGGGACCTTGTAAAGGATATTTTCCCAGATACTTTTTCAACCACACATCTGGACAGTGTGATAAATTTATTTATGGTGGTTGTCTGGGAAACAGCAATCGCTTCCCTACTCTTGAGCTATGCCAGAAGAAGTGTAAAATAGCTTCAGGTGAACTTGTCCAAGAAAAACCTGGCCACTGCCCATGGCGAAGGAGTGTTGTTAGACTTTGTCTTCTAAGAGGAAACGCTTGTACATCAGATCAAGAGTGCCCGGGTGACAATAAATGTTGTCATGACGGCTGCAGCTTGTCCTGTGCCAGACCAATCAGTGAGGACAAACCAGGCACTTGCCCTAAGGTGTCCCAAAATAGGCCTTTCTGTGACAAGAAAGGAGATATGTGTAAAAAGGACACTGACTGTCCTGGGATTCGAAAGTGTTGCCACAATGGCTGCCAGAGGGATTGTACTGTTCCCGACACTATGCAAAAGCTGAAACCAGGTGTTTGCCCTGTGCTGGATGCTATTGATCCAAAGCTGTGCAAAAGCACAAAAAATGAATGCAAACTTGATGGCGATTGCTATGGTCATCTGAAATGCTGCTTTAATGGATGTTTTAATGAGTGTTCCAGCATACCAAAACCCCGTCCAAAACTCGGAGAGTGTCCACTTGCTGACTACATCCCACCAGAGAATTGTTCAGATACCACTGATAAGTGTGATGGTGATTCACAATGCCCAGGTAGAGATAAGTGTTGTGCAACAGGGTGTCTTCAAGAGTGTATCACTCCTCCAGCTAAAAAGAAGCCTGGCGAGTGTCCGTTGAATGATTATATTCCACCTGAGCTTTGTGAGGTAACAGAAGATGAGTGCCAGGTAGACGAGGATTGCAAAGGGAGAGACAAATGCTGTGCAACAGGTTGCATTCTGGAATGTATCACTCCCCCCATCATAGACAAACCTGGCATGTGCCCTACTGTAGATAACATTGACCCTGAATCATGTGACGTGACAACTGATGAGTGCGGTGAAGATGAGGATTGTAAAGGAGATGATAAATGTTGTGATACAGGATGCATAAAGGAGTGTGTAACACCGCCACTCCCTACCCCCTCTACACTTGAGCCTAAAAAGAAATGTCCAAAACCTTGGAAGGGGCTTAATGGTAACTGTGAAAGCATTAGTTTCATGTGTGCTGATGACAAAGATTGTAGTGGATCATCTTTGTGCTGTTCTGATGGATGCGAGCAATATTGCATTGATCCTGTACCAAAAGATAAACCAGGTGAATGTCCAAACCCATGGAAAGGAAAAGATGGTATTTGTGACCGTCGTGGGGACATGTGCACTGTAGATACCGACTGTGATGGATTTACAAAGTGCTGCTTTAATGGTTGTCAGCGTGATTGCGTAAAGCCTGGCAAGAAGTCTGAAGAAAAGCCAGGTCAGTGCCCCAATCCATGGAAAGAGCAGCCATGTGACAGAAGAGGAGATATGTGCGAGGAAGATAGTGAATGCGATTCTGGAAGCAAGTGTTGTCATAACGGCTGTCAAAAGGATTGTGTCAAACCAGTGAATCTGACAAAATGCCAAGAGGAAAGACAATCTGCTCTTGACAAGTTGGCTTTAGACCCTCCTCTGCTTGGCGAGTTTAAACCAAAGTGTAAACCAGATGGACAGTATGAGGATCAACAGTGTCATGAGTTATACTGCTGGTGTGTAGACAAAAGTGGCCTGAAAATACCTGGTACAACCATTCAAGGGCCTGCAGTCTGTTTACCGCGAG

Transcript

evm.model.contig_80276.1

atgttggcatcaccatttctcgcgGCCatgagaaatgTGATTTCCTTAAAGGTCAGCCCAGCCCATCAGTCTTCACAAACCTTGATAATTGGCAAACCAGGTGAAATTCATTGTGGGATTGAAGGAAAGGCAGCTCAAGTCTTATGGCGCAAAGTTGGCATGAAGCATcgccttgtttattcaagagtgaGATCTTTCAATTCTAAAACTCTTCGTTTCCGTCGTGTACAGGAGCAAGATTCAGGGAAATATGTGTGTCGGGCTATTTCAATGTCTGCAACTGTGACGGCTACCATAAATGTTTCTGTTGAGGCTGCTAAGGTTCCAAAGCCAGGGGACACAAGTGTGGCATCAAACCTTGTGTGCAATTTGGAAAAGCTTGTTGGTACTGGAAGTGATCCAGCTAAATTTTCACCTCGCTGGTATTTTGACAGCAAAGGGTCACATATGTGTGAATCATTTCTCTACAGTGGCAGTGGTGGcaatgaaaacaattttaaaaccaaAGCTGTTTGCATCCAAAAGTGCTCCCATGCAGctggtGATGTTTGTGGTCTCCCCAAACAGCCTGGGATGTGTATGGGCTATTTTCAAAAATGGTTCTATAGTCCCCAAACTGGAGAATGTGAGTTTTTTATTTATGGTGGTTGCCAAGGAAATGCAAACAACTTTAATTCCGAGGAGGAGTGTGAAGAGGCTTGTTCAGCTGATGTTGTTTGCAAATTTCAACCAGAAGTGGGACCTTGTAAAGGATATTTTCCCAGATACTTTTTCAACCACACATCTGGACAGTGTGATAAATTTATTTATGGTGGTTGTCTGGGAAACAGCAATCGCTTCCCTACTCTTGAGCTATGCCAGAAGAAGTGTAAAATAGCTTCAGGTGAACTTGTCCAAGAAAAACCTGGCCACTGCCCATGGCGAAGGAGTGTTGTTAGACTTTGTCTTCTAAGAGGAAACGCTTGTACATCAGATCAAGAGTGCCCGGGTGACAATAAATGTTGTCATGACGGCTGCAGCTTGTCCTGTGCCAGACCAATCAGTGAGGACAAACCAGGCACTTGCCCTAAGGTGTCCCAAAATAGGCCTTTCTGTGACAAGAAAGGAGATATGTGTAAAAAGGACACTGACTGTCCTGGGATTCGAAAGTGTTGCCACAATGGCTGCCAGAGGGATTGTACTGTTCCCGACACTATGCAAAAGCTGAAACCAGGTGTTTGCCCTGTGCTGGATGCTATTGATCCAAAGCTGTGCAAAAGCACAAAAAATGAATGCAAACTTGATGGCGATTGCTATGGTCATCTGAAATGCTGCTTTAATGGATGTTTTAATGAGTGTTCCAGCATACCAAAACCCCGTCCAAAACTCGGAGAGTGTCCACTTGCTGACTACATCCCACCAGAGAATTGTTCAGATACCACTGATAAGTGTGATGGTGATTCACAATGCCCAGGTAGAGATAAGTGTTGTGCAACAGGGTGTCTTCAAGAGTGTATCACTCCTCCAGCTAAAAAGAAGCCTGGCGAGTGTCCGTTGAATGATTATATTCCACCTGAGCTTTGTGAGGTAACAGAAGATGAGTGCCAGGTAGACGAGGATTGCAAAGGGAGAGACAAATGCTGTGCAACAGGTTGCATTCTGGAATGTATCACTCCCCCCATCATAGACAAACCTGGCATGTGCCCTACTGTAGATAACATTGACCCTGAATCATGTGACGTGACAACTGATGAGTGCGGTGAAGATGAGGATTGTAAAGGAGATGATAAATGTTGTGATACAGGATGCATAAAGGAGTGTGTAACACCGCCACTCCCTACCCCCTCTACACTTGAGCCTAAAAAGAAATGTCCAAAACCTTGGAAGGGGCTTAATGGTAACTGTGAAAGCATTAGTTTCATGTGTGCTGATGACAAAGATTGTAGTGGATCATCTTTGTGCTGTTCTGATGGATGCGAGCAATATTGCATTGATCCTGTACCAAAAGATAAACCAGGTGAATGTCCAAACCCATGGAAAGGAAAAGATGGTATTTGTGACCGTCGTGGGGACATGTGCACTGTAGATACCGACTGTGATGGATTTACAAAGTGCTGCTTTAATGGTTGTCAGCGTGATTGCGTAAAGCCTGGCAAGAAGTCTGAAGAAAAGCCAGGTCAGTGCCCCAATCCATGGAAAGAGCAGCCATGTGACAGAAGAGGAGATATGTGCGAGGAAGATAGTGAATGCGATTCTGGAAGCAAGTGTTGTCATAACGGCTGTCAAAAGGATTGTGTCAAACCAGTGAATCTGACAAAATGCCAAGAGGAAAGACAATCTGCTCTTGACAAGTTGGCTTTAGACCCTCCTCTGCTTGGCGAGTTTAAACCAAAGTGTAAACCAGATGGACAGTATGAGGATCAACAGTGTCATGAGTTATACTGCTGGTGTGTAGACAAAAGTGGCCTGAAAATACCTGGTACAACCATTCAAGGGCCTGCAGTCTGTTTACCGCGAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00095 all species →	WAP	WAP-type (Whey Acidic Protein) 'four-disulfide core'	Domain	Interproscan
PF00014 all species →	Kunitz_BPTI	Kunitz/Bovine pancreatic trypsin inhibitor domain	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036645 all species →	Homologous_superfamily	Elafin-like superfamily	Interproscan
IPR000716 all species →	Domain	Thyroglobulin type-1	Interproscan
IPR036880 all species →	Homologous_superfamily	Pancreatic trypsin inhibitor Kunitz domain superfamily	Interproscan
IPR008197 all species →	Domain	WAP-type 'four-disulfide core' domain	Interproscan
IPR020901 all species →	Conserved_site	Proteinase inhibitor I2, Kunitz, conserved site	Interproscan
IPR002223 all species →	Domain	Pancreatic trypsin inhibitor Kunitz domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR036857 all species →	Homologous_superfamily	Thyroglobulin type-1 superfamily	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR051388 all species →	Family	Serine protease inhibitor and venom toxin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46751 all species →	EPPIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004867 all species →	Molecular Function	serine-type endopeptidase inhibitor activity	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0030414 all species →	Molecular Function	peptidase inhibitor activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0010466 all species →	Biological Process	negative regulation of peptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_80276.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.